# ----------------------------------------------------------------------------- # Pacsy Rama # ----------------------------------------------------------------------------- # # Ramachandran plot image files derived from PACSY database (PNG format) # Developed by Woonghee Lee # e-mail: whlee@nmrfam.wisc.edu # National Magnetic Resonance Facilities at Madison # Department of Bichemistry, University of Wisconsin at Madison # # Last updated: November 28, 2014 # # ----------------------------------------------------------------------------- PACSY 07/16/2015 version SS definition (code from STRIDE) H: H, G, I, T E: E, B, b C: C PACSY paper: Lee, W. et al J. Biol. NMR (2012) Please cite this or/and upcoming paper. Color representation 4 x 4 degree voxel (90x90) Natural log (occurences) Scaled to 127-255 -> r (strand), g (coil), b (helix) Color(i, j) = RGB(255-r, 255-g, 255-b)